BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031D08SP1|AL429390
(492 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1761 847 0.0
>3x_Contig1761
Length = 23186
Score = 847 bits (422), Expect = 0.0
Identities = 469/490 (95%)
Strand = Plus / Minus
Query: 1 gtctggtgcgtactcaccatattcggccaccgcagcaggwacgttgggcccatttgcatt 60
|||||| |||||| ||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 21434 gtctggagcgtacacaccatacccggccaccgcagcaggaacgttgggcccatttgcatt 21375
Query: 61 agccaacggagctggtggttgaccgcttacctgaggtggcaatacaggttgtacttgttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21374 agccaacggagctggtggttgaccgcttacctgaggtggcaatacaggttgtacttgttc 21315
Query: 121 caaaggaacgtctaabatgtttaantccttaacgtcattwccgttgaaaggcaccgtatc 180
||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 21314 caaaggaacgtctaaaatgtttaaatccttaacgtcattaccgttgaaaggcaccgtatc 21255
Query: 181 gtagatattagggttgggatagatttcttccgggccccatcccttgcgtccctctgtacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21254 gtagatattagggttgggatagatttcttccgggccccatcccttgcgtccctctgtacc 21195
Query: 241 gaaacaacgaacttgtcttaaagtaacaacacctttctcagagtcaatagactccmataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 21194 gaaacaacgaacttgtcttaaagtaacaacacctttctcagagtcaatagactccaataa 21135
Query: 301 gccgacataacggttatcagtwttcgahataagagcmatagtcttaccaatatattgcga 360
||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||
Sbjct: 21134 gccgacataacggttatcagtattcgaaataagagcaatagtcttaccaatatattgcga 21075
Query: 361 catcctttcaaaaagtggacactctataatcaataaattaacttctaanacccactagat 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 21074 catcctttcaaaaagtggacactctataatcaataaattaacttctaaaacccactagat 21015
Query: 421 acaaacmaatatccttcttgaacaacgatcaatgtgtgggatttgttcttasttccgagc 480
|||||| ||||||||||||||||||||||||| |||||||| | ||||| | || ||||
Sbjct: 21014 acaaacaaatatccttcttgaacaacgatcaaagtgtgggaatagttctaaattaagagc 20955
Query: 481 gaacgttagc 490
||||||||||
Sbjct: 20954 gaacgttagc 20945
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2141
Number of Sequences: 1807
Number of extensions: 2141
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 492
length of database: 10,358,551
effective HSP length: 15
effective length of query: 477
effective length of database: 10,331,446
effective search space: 4928099742
effective search space used: 4928099742
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 49 (98.8 bits)